PBK model definitions

In this module, PBK models with code representation in SBML format (Systems Biology Markup Language) are uploaded (with extension .sbml). Currently only Level 3, Version 2 is supported.

SBML has three main purposes:

  • enable the use of multiple software tools without having to rewrite models to conform to every tool’s idiosyncratic file format;

  • enable models to be shared and published in a form that other researchers can use even when working with different software environments;

  • ensure the survival of models beyond the lifetime of the software used to create them.

See also wiki , SBML portal .

Output of this module is used by: PBK model parametrisations

PBK model definitions as data

PBK model definitions implement an uploadable version of PBK (SBML) models.