PBK model parametrisations data formats
- Data tables:
Kinetic model instances
Kinetic model instance parameters
PBK model parametrisations are specifications of parameter values of for PBK model definitions.
PBK model data format
The PBK model parametrisations data format specifies parameter values of for PBK model definitions.
Download empty dataset template:
PBK model instances
PBK model instances/parametrisations.
Accepted table names: PbkModelInstances, PbkModelParametrisations, KineticModelInstances, KineticModelInstance.
| Name | Type | Description | Aliases | Required |
|---|---|---|---|---|
idModelInstance |
AlphaNumeric (50) |
Unique identification code of the PBK model instance/parametrisation. |
idModelInstance, Id, Code |
Yes |
idModelDefinition |
KineticModelType |
Identifier of the PBK model definition of which this is an instance/parametrisation. |
idModelDefinition, ModelDefinition |
Yes |
Species |
AlphaNumeric (50) |
The species to which this instance/parametrisation applies. |
Species, System, TestSystem |
Yes |
Substances |
AlphaNumeric (150) |
Code or comma separated list of the codes of the substances. Only applies for substance-specific parameters. |
idSubstance, idSubstances, SubstanceId, SubstanceCode, SubstanceCodes, Substance, Substances |
No |
Reference |
AlphaNumeric (100) |
Reference or author. |
References |
No |
Name |
AlphaNumeric (100) |
Name of the kinetic model instance/parametrisation. |
Name |
No |
Description |
AlphaNumeric (200) |
Additional description of the model instance/parametrisation. |
Description |
No |
PBK model instance parameters
PBK model instance/parametrisation parameter values.
Accepted table names: PbkModelInstanceParameters, PbkModelInstanceParameterValues, KineticModelInstanceParameters, KineticModelInstanceParameter.
| Name | Type | Description | Aliases | Required |
|---|---|---|---|---|
idModelInstance |
AlphaNumeric (50) |
Unique identification code of the kinetic model instance to which this parameter belongs |
Id, Code |
Yes |
Parameter |
AlphaNumeric (50) |
Identifier of the parameter in the PBK model. |
Yes |
|
Description |
AlphaNumeric (200) |
Description of or reference for the parameter values in the model. |
No |
|
Value |
Numeric |
Nominal parameter value of the distribution. |
Mean |
Yes |
DistributionType |
PbkModelParameterDistributionType | Parameter distribution type. |
DistributionType, Distribution |
No |
CvVariability |
Numeric |
Variability of the parameter expressed as a coefficient of variation (CV). |
No |
|
CvUncertainty |
Numeric |
Uncertainty of the parameter expressed as a coefficient of variation (CV). |
No |