Kinetic models data formats

Data tables:
  • Absorption factors

  • Kinetic model instances

  • Kinetic model instance parameters

Kinetic models are specified as kinetic model instances that contain parameter specifications of built in kinetic models or as simple absorption factors.

Download empty dataset template: Zipped CSV Excel

Kinetic model instances

Kinetic model instances.

Accepted table names: KineticModelInstances, KineticModelInstance.

Table 186 Table definition for Kinetic model instances.
Name Type Description Aliases Required

idModelInstance

AlphaNumeric (50)

Unique identification code of the kinetic model instance.

idModelInstance, Id, Code

Yes

idModelDefinition

KineticModelType

Identifier of the kinetic model definition for which this is an instance.

idModelDefinition, ModelDefinition

Yes

idTestSystem

AlphaNumeric (50)

The species on which the experiment was performed.

System, TestSystem

Yes

Substances

AlphaNumeric (150)

Code or comma separated list of the codes of the substances. Unique identification code of substance, Default: valid for all substances. Should be omitted for parameters in the class Physiological

idSubstance, idSubstances, SubstanceId, SubstanceCode, SubstanceCodes, Substance, Substances

No

Reference

AlphaNumeric (100)

Reference or author.

References

No

Name

AlphaNumeric (100)

Name of the kinetic model instance.

Name

No

Description

AlphaNumeric (200)

Additional description of the kinetic model instance.

Description

No

Kinetic model instance parameters

Kinetic model parameters

Accepted table names: KineticModelInstanceParameters, KineticModelInstanceParameter.

Table 187 Table definition for Kinetic model instance parameters .
Name Type Description Aliases Required

idModelInstance

AlphaNumeric (50)

Unique identification code of the kinetic model instance to which this parameter belongs

Id, Code

Yes

Parameter

AlphaNumeric (50)

Name of the parameter in the kinetic model.

Yes

Description

AlphaNumeric (200)

Description of or reference for the parameter values in the kinetic model.

No

Value

Numeric

Mean.

MEAN, mean

Yes

DistributionType

AlphaNumeric (100)

Distribution.

DistributionType, Distribution

No

CvVariability

Numeric

Variability.

No

CvUncertainty

Numeric

Uncertainty.

No

Kinetic model absorption factors

Kinetic absorption factors

Accepted table names: KineticAbsorptionFactors, KineticAbsorptionFactor, AbsorptionFactors, AbsorptionFactor.

Table 188 Table definition for Kinetic model absorption factors .
Name Type Description Aliases Required

idCompound

AlphaNumeric (50)

code of substance (must correspond to values in id column of Substances table)

idSubstance, SubstanceId, SubstanceCode, Substance

No

Route

ExposureRouteType

Non-dietary route or pathway, use ‘Oral’, ‘Dermal’, or ‘Inhalation’ to specify the route.

Route, Pathway

Yes

AbsorptionFactor

Numeric

absorption factor value

AbsorptionFactor, Factor

Yes